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UCSC canFam5 (gbdb)

The UCSC Genomics Institute maintains a broad collection of vertebrate and model organism assemblies and annotations, along with a large suite of tools for viewing, analyzing and downloading data.

Database Organization UCSC Genomics Institute 
Database Website https://genome.ucsc.edu/
Location /fdb/genomebrowser/gbdb/canFam5
Last Updated 2024-03-02
Organism Canis lupus familiaris
Related Application ucsc
Update Schedule weekly

36 Relevant Files

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/fdb/genomebrowser/gbdb/canFam5/canFam5.2bit
/fdb/genomebrowser/gbdb/canFam5/trackDb.ix
/fdb/genomebrowser/gbdb/canFam5/trackDb.ixx
/fdb/genomebrowser/gbdb/canFam5/trackDb.offsets
/fdb/genomebrowser/gbdb/canFam5/trackDb.offsets.ixx
/fdb/genomebrowser/gbdb/canFam5/trackDb.txt
/fdb/genomebrowser/gbdb/canFam5/TOGAvHg38v1/HLTOGAannotVsHg38v1.bb
/fdb/genomebrowser/gbdb/canFam5/TOGAvHg38v1/HLTOGAannotVsHg38v1.ix
/fdb/genomebrowser/gbdb/canFam5/TOGAvHg38v1/HLTOGAannotVsHg38v1.ixx
/fdb/genomebrowser/gbdb/canFam5/bbi/gc5BaseBw/gc5Base.bw
/fdb/genomebrowser/gbdb/canFam5/html/description.html
/fdb/genomebrowser/gbdb/canFam5/liftOver/canFam5ToCanFam3.over.chain.gz
/fdb/genomebrowser/gbdb/canFam5/liftOver/canFam5ToCanFam4.over.chain.gz
/fdb/genomebrowser/gbdb/canFam5/liftOver/canFam5ToCanFam6.over.chain.gz
/fdb/genomebrowser/gbdb/canFam5/liftOver/canFam5ToHg38.over.chain.gz
/fdb/genomebrowser/gbdb/canFam5/liftOver/canFam5ToMm10.over.chain.gz
/fdb/genomebrowser/gbdb/canFam5/liftOver/canFam5ToMm39.over.chain.gz
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipAliSwissprot.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipAliTrembl.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipChain.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipConflict.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipDisulfBond.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipDomain.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipFullSeq.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipInterest.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipLocCytopl.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipLocExtra.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipLocSignal.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipLocTransMemb.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipModif.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipMut.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipOther.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipRepeat.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipSplice.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/unipStruct.bb
/fdb/genomebrowser/gbdb/canFam5/uniprot/version.txt

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